Transcript: lnc-SLC10A6-2:8

Basic information

LNCipedia transcript ID: lnc-SLC10A6-2:8 
LNCipedia gene ID: lnc-SLC10A6-2
Location (hg19): chr4:86921480-86921919
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 440 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000610225.1
Alternative gene names: ENSG00000273389.1; RP13-514E23.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 454.2159 coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC10A6-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAPK10-2:1
4.0 lnc-MAPK10-2:1
4.1 lnc-MAPK10-2:1
5.0 lnc-MAPK10-2:1
5.1 lnc-SPARCL1-20:1
5.2 lnc-SLC10A6-2:8