Transcript: lnc-SLC11A2-6:1

Basic information

LNCipedia transcript ID: lnc-SLC11A2-6:1 
LNCipedia gene ID: lnc-SLC11A2-6
Ensembl Gene ID: ENSG00000274156
Ensembl Transcript ID: ENST00000614647
Location (hg19): chr12:51328725-51329247
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 523 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614647.1
Alternative gene names: ENSG00000274156.1; RP11-407N8.6; AC008121.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -140.477 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC11A2-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SLC11A2-6:1
4.1 lnc-SLC11A2-6:1
5.0 lnc-SLC11A2-6:1
5.1 lnc-BIN2-11:1
5.2 lnc-SLC11A2-6:1