Transcript: lnc-SLC12A7-5:5

Basic information

LNCipedia transcript ID: lnc-SLC12A7-5:5 
LNCipedia gene ID: lnc-SLC12A7-5
Location (hg19): chr5:1174645-1182915
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1403 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT099988
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.4251 non-coding 
CPAT coding probability 6.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC12A7-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC12A7-5:5
4.0 lnc-SLC12A7-5:5
4.1 lnc-SLC12A7-5:5
5.0 lnc-SLC12A7-5:5
5.1 lnc-IRX2-23:6
5.2 lnc-SLC12A7-5:5