Transcript: lnc-SLC15A4-19:1

Basic information

LNCipedia transcript ID: lnc-SLC15A4-19:1 
LNCipedia gene ID: lnc-SLC15A4-19
Location (hg19): chr12:129927102-129927844
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 743 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_chen_CA413242_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.2561 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC15A4-19:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC15A4-19:1
4.0 lnc-SLC15A4-19:1
4.1 lnc-SLC15A4-19:1
5.0 lnc-SLC15A4-19:1
5.1 lnc-RIMBP2-24:1
5.2 lnc-SLC15A4-19:1