Transcript: lnc-SLC19A1-7:8

Basic information

LNCipedia transcript ID: lnc-SLC19A1-7:8 
LNCipedia gene ID: lnc-SLC19A1-7
Location (hg19): chr21:46823721-46824900
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1180 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000057003.1|MICT00000228021.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -97.1477 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC19A1-7:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC19A1-7:8
5.0 lnc-SLC19A1-7:8
5.1 lnc-SLC19A1-7:8
5.2 lnc-SLC19A1-7:8