Transcript: lnc-SLC22A18-9:1

Basic information

LNCipedia transcript ID: lnc-SLC22A18-9:1 
LNCipedia gene ID: lnc-SLC22A18-9
Location (hg19): chr11:3242905-3243597
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 693 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT017571; ENST00000541883.1
Alternative gene names: ENSG00000236301.4; MRGPRG-AS1; FLJ36102; HSD-40


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.5918 non-coding 
CPAT coding probability 58.84% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC22A18-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf36-4:4
4.0 MRGPRG-AS1:4
4.1 MRGPRG-AS1:4
5.0 MRGPRG-AS1:4
5.1 lnc-OR51M1-151:1
5.2 lnc-SLC22A18-9:1