Transcript: lnc-SLC22A23-11:2

Basic information

LNCipedia transcript ID: lnc-SLC22A23-11:2 
LNCipedia gene ID: lnc-SLC22A23-11
Location (hg19): chr6:3538726-3541048
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1292 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3093_chr6:3538725-3541048_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.542 non-coding 
CPAT coding probability 5.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC22A23-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC22A23-11:2
4.0 lnc-SLC22A23-11:2
4.1 lnc-SLC22A23-11:2
5.0 lnc-SLC22A23-11:2
5.1 lnc-ECI2-41:2
5.2 lnc-SLC22A23-11:2