Transcript: lnc-SLC22A31-4:1

Basic information

LNCipedia transcript ID: lnc-SLC22A31-4:1 
LNCipedia gene ID: lnc-SLC22A31-4
Location (hg19): chr16:89293103-89299484
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6066 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT144488
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.4996 non-coding 
CPAT coding probability 23.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC22A31-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD11-4:2
4.0 lnc-ANKRD11-4:2
4.1 lnc-ANKRD11-4:2
5.0 lnc-ANKRD11-4:2
5.1 lnc-KLHDC4-47:1
5.2 lnc-SLC22A31-4:1