Transcript: lnc-SLC22A31-5:4

Basic information

LNCipedia transcript ID: lnc-SLC22A31-5:4 
LNCipedia gene ID: lnc-SLC22A31-5
Location (hg19): chr16:89281572-89284033
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2462 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA553:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 74.8967 coding 
CPAT coding probability 29.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC22A31-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ANKRD11-5:3
4.1 lnc-ANKRD11-5:3
5.0 lnc-ANKRD11-5:3
5.1 lnc-KLHDC4-46:4
5.2 lnc-SLC22A31-5:4