Transcript: lnc-SLC22A9-2:1

Basic information

LNCipedia transcript ID: lnc-SLC22A9-2:1 
LNCipedia gene ID: lnc-SLC22A9-2
Location (hg19): chr11:63018729-63024659
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1139 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_487_chr11:63018728-63024659_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.3049 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC22A9-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC22A9-2:1
4.0 lnc-SLC22A9-2:1
4.1 lnc-SLC22A9-2:1
5.0 lnc-SLC22A9-2:1
5.1 lnc-TMEM179B-14:1
5.2 lnc-SLC22A9-2:1