Transcript: lnc-SLC24A3-1:15

Basic information

LNCipedia transcript ID: lnc-SLC24A3-1:15 
LNCipedia gene ID: lnc-SLC24A3-1
Location (hg19): chr20:19738709-19795924
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 447 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233895.1|ENCT00000259903.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -143.6959 non-coding 
CPAT coding probability 7.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC24A3-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC24A3-1:15
5.0 lnc-SLC24A3-1:15
5.1 lnc-CFAP61-9:12
5.2 lnc-SLC24A3-1:15