Transcript: lnc-SLC25A1-5:4

Basic information

LNCipedia transcript ID: lnc-SLC25A1-5:4 
LNCipedia gene ID: lnc-SLC25A1-5
Location (hg19): chr22:19153341-19159127
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5563 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058145.1|MICT00000229126.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.7979 non-coding 
CPAT coding probability 5.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A1-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC25A1-5:4
5.0 lnc-SLC25A1-5:4
5.1 lnc-RTN4R-23:2
5.2 lnc-SLC25A1-5:4