Transcript: lnc-SLC25A13-1:2

Basic information

LNCipedia transcript ID: lnc-SLC25A13-1:2 
LNCipedia gene ID: lnc-SLC25A13-1
RefSeq ID: NR_038948
Location (hg19): chr7:96250969-96293650
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1577 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT122110; NR_038948; NR_038948.1
Alternative gene names: LOC100506136


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.2262 non-coding 
CPAT coding probability 3.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A13-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092031.1-1:12
4.0 lnc-AC092031.1-1:12
4.1 lnc-AC092031.1-1:12
5.0 lnc-AC092031.1-1:12
5.1 lnc-CYP3A5-28:2
5.2 lnc-SLC25A13-1:2