Transcript: lnc-SLC25A13-1:5

Basic information

LNCipedia transcript ID: lnc-SLC25A13-1:5 
LNCipedia gene ID: lnc-SLC25A13-1
Location (hg19): chr7:96251742-96293570
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 479 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013894; NONHSAT122111
Alternative gene names: XLOC_006529; linc-SLC25A13


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.6189 non-coding 
CPAT coding probability 6.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A13-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC092031.1-1:4
3.1 lnc-AC092031.1-1:4
4.0 lnc-AC092031.1-1:4
4.1 lnc-AC092031.1-1:4
5.0 lnc-AC092031.1-1:4
5.1 lnc-CYP3A5-28:5
5.2 lnc-SLC25A13-1:5