Transcript: lnc-SLC25A16-3:1

Basic information

LNCipedia transcript ID: lnc-SLC25A16-3:1 
LNCipedia gene ID: lnc-SLC25A16-3
Location (hg19): chr10:70545609-70550589
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3884 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000501160
Alternative gene names: ENSG00000247499


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.0784 non-coding 
CPAT coding probability 2.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A16-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC25A16-2:1
3.1 lnc-SLC25A16-3:1
4.0 lnc-SLC25A16-3:1
4.1 lnc-SLC25A16-3:1
5.0 lnc-SLC25A16-3:1
5.1 lnc-C10orf105-43:1
5.2 lnc-SLC25A16-3:1