Transcript: lnc-SLC25A25-5:3

Basic information

LNCipedia transcript ID: lnc-SLC25A25-5:3 
LNCipedia gene ID: lnc-SLC25A25-5
Location (hg19): chr9:130743521-130747921
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4401 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000107113.1|ENCT00000450673.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.058 non-coding 
CPAT coding probability 17.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A25-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC25A25-5:3
5.0 lnc-SLC25A25-5:3
5.1 lnc-PTPA-73:3
5.2 lnc-SLC25A25-5:3