Transcript: lnc-SLC25A32-3:16

Basic information

LNCipedia transcript ID: lnc-SLC25A32-3:16 
LNCipedia gene ID: lnc-SLC25A32-3
Location (hg19): chr8:104492962-104513903
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3411 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253477.1|ENCT00000438960.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.3006 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A32-3:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC25A32-3:16
5.0 lnc-SLC25A32-3:16
5.1 lnc-ZNF706-80:6
5.2 lnc-SLC25A32-3:16