Transcript: lnc-SLC26A3-1:13

Basic information

LNCipedia transcript ID: lnc-SLC26A3-1:13 
LNCipedia gene ID: lnc-SLC26A3-1
Location (hg19): chr7:107376453-107384470
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7489 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000241764.3|ENCT00000416047.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.3994 non-coding 
CPAT coding probability 8.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC26A3-1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC26A3-1:13
5.0 lnc-SLC26A3-1:13
5.1 lnc-NRCAM-10:10
5.2 lnc-SLC26A3-1:13