Transcript: lnc-SLC26A3-1:3

Basic information

LNCipedia transcript ID: lnc-SLC26A3-1:3 
LNCipedia gene ID: lnc-SLC26A3-1
Location (hg19): chr7:107383277-107384610
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 797 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT122712
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.1579 non-coding 
CPAT coding probability 8.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC26A3-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC26A3-1:3
4.0 lnc-SLC26A3-1:3
4.1 lnc-SLC26A3-1:3
5.0 lnc-SLC26A3-1:3
5.1 lnc-NRCAM-10:6
5.2 lnc-SLC26A3-1:3