Transcript: lnc-SLC26A3-1:6

Basic information

LNCipedia transcript ID: lnc-SLC26A3-1:6 
LNCipedia gene ID: lnc-SLC26A3-1
Location (hg19): chr7:107382832-107384278
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1447 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT122705
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.1579 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC26A3-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC26A3-1:6
4.0 lnc-SLC26A3-1:6
4.1 lnc-SLC26A3-1:6
5.0 lnc-SLC26A3-1:6
5.1 lnc-NRCAM-10:15
5.2 lnc-SLC26A3-1:6