Transcript: lnc-SLC29A4-5:4

Basic information

LNCipedia transcript ID: lnc-SLC29A4-5:4 
LNCipedia gene ID: lnc-SLC29A4-5
Location (hg19): chr7:5463689-5466204
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2516 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272953.1|FTMT22800000225.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.9227 non-coding 
CPAT coding probability 10.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC29A4-5:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC29A4-5:4
5.0 lnc-SLC29A4-5:4
5.1 lnc-SLC29A4-5:4
5.2 lnc-SLC29A4-5:4