Transcript: lnc-SLC30A4-4:3

Basic information

LNCipedia transcript ID: lnc-SLC30A4-4:3 
LNCipedia gene ID: lnc-SLC30A4-4
Location (hg19): chr15:45840533-45879302
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1107 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000024824.1|MICT00000116033.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -111.0574 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC30A4-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC30A4-4:3
5.0 lnc-SLC30A4-4:3
5.1 lnc-SERINC4-41:2
5.2 lnc-SLC30A4-4:3