Transcript: lnc-SLC30A7-2:27

Basic information

LNCipedia transcript ID: lnc-SLC30A7-2:27 
LNCipedia gene ID: lnc-SLC30A7-2
Location (hg19): chr1:101491463-101551175
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1476 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233184.2|FTMT20300107769.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.1957 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC30A7-2:27 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC30A7-2:27
5.0 lnc-SLC30A7-2:27
5.1 lnc-SLC30A7-2:27
5.2 lnc-SLC30A7-2:27