Transcript: lnc-SLC35A3-1:4

Basic information

LNCipedia transcript ID: lnc-SLC35A3-1:4 
LNCipedia gene ID: lnc-SLC35A3-1
Location (hg19): chr1:100496122-100501193
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5072 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000564623.2
Alternative gene names: ENSG00000261254.2; RP4-714D9.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.0123 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35A3-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-HIAT1-1:3
4.1 lnc-HIAT1-1:3
5.0 lnc-HIAT1-1:3
5.1 lnc-SLC30A7-31:3
5.2 lnc-SLC35A3-1:4