Transcript: lnc-SLC35F5-10:6

Basic information

LNCipedia transcript ID: lnc-SLC35F5-10:6 
LNCipedia gene ID: lnc-SLC35F5-10
Location (hg19): chr2:114462588-114480771
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 784 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT073830
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 105.6139 coding 
CPAT coding probability 4.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC35F5-10:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC35F5-10:6
4.0 lnc-SLC35F5-10:6
4.1 lnc-SLC35F5-10:6
5.0 lnc-SLC35F5-10:6
5.1 lnc-EN1-30:4
5.2 lnc-SLC35F5-10:6