Transcript: lnc-SLC35F5-10:7

Basic information

LNCipedia transcript ID: lnc-SLC35F5-10:7 
LNCipedia gene ID: lnc-SLC35F5-10
Location (hg19): chr2:114475358-114477288
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 628 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT073834
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.7725 non-coding 
CPAT coding probability 3.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35F5-10:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC35F5-10:7
4.0 lnc-SLC35F5-10:7
4.1 lnc-SLC35F5-10:7
5.0 lnc-SLC35F5-10:7
5.1 lnc-EN1-30:5
5.2 lnc-SLC35F5-10:7