Transcript: lnc-SLC35F5-19:2

Basic information

LNCipedia transcript ID: lnc-SLC35F5-19:2 
LNCipedia gene ID: lnc-SLC35F5-19
RefSeq ID: NR_034130
Location (hg19): chr2:114735246-114737561
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2316 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT073857; NR_034130; NR_034130.1
Alternative gene names: LOC100499194


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.6494 non-coding 
CPAT coding probability 5.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35F5-19:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC35F5-19:2
4.0 lnc-SLC35F5-19:2
4.1 lnc-SLC35F5-19:2
5.0 lnc-SLC35F5-19:2
5.1 lnc-EN1-19:2
5.2 lnc-SLC35F5-19:2