Transcript: lnc-SLC36A2-2:2

Basic information

LNCipedia transcript ID: lnc-SLC36A2-2:2 
LNCipedia gene ID: lnc-SLC36A2-2
Location (hg19): chr5:150792082-150804699
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 316 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081667.1|HBMT00001171859.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 3.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC36A2-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC36A2-2:2
5.0 lnc-SLC36A2-2:2
5.1 lnc-FAXDC2-31:2
5.2 lnc-SLC36A2-2:2