Transcript: lnc-SLC36A4-5:5

Basic information

LNCipedia transcript ID: lnc-SLC36A4-5:5 
LNCipedia gene ID: lnc-SLC36A4-5
RefSeq ID: NR_135091
Location (hg19): chr11:92646404-92648794
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1764 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135091.1
Alternative gene names: LOC105369431


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.9651 non-coding 
CPAT coding probability 6.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC36A4-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-NOX4-32:1
5.1 lnc-NOX4-32:1
5.2 lnc-SLC36A4-5:5