Transcript: lnc-SLC38A1-6:1

Basic information

LNCipedia transcript ID: lnc-SLC38A1-6:1 
LNCipedia gene ID: lnc-SLC38A1-6
Location (hg19): chr12:46764582-46766556
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 846 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT027860
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
VLVFRIYICIMAAK 93.3333333333333% antisense-2
Lee translation initiation sites 2 non-coding 
PhyloCSF score 285.4914 coding 
CPAT coding probability 34.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC38A1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC38A1-6:1
4.0 lnc-SLC38A1-6:1
4.1 lnc-SLC38A1-6:1
5.0 lnc-SLC38A1-6:1
5.1 lnc-RPAP3-14:1
5.2 lnc-SLC38A1-6:1