Transcript: lnc-SLC39A8-1:8

Basic information

LNCipedia transcript ID: lnc-SLC39A8-1:8 
LNCipedia gene ID: lnc-SLC39A8-1
Location (hg19): chr4:103225564-103274157
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 678 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT097579
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -217.6929 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC39A8-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MANBA-1:6
4.0 lnc-SLC39A8-1:8
4.1 lnc-SLC39A8-1:8
5.0 lnc-SLC39A8-1:8
5.1 lnc-SLC9B2-14:7
5.2 lnc-SLC39A8-1:8