Transcript: lnc-SLC47A1-6:1

Basic information

LNCipedia transcript ID: lnc-SLC47A1-6:1 
LNCipedia gene ID: lnc-SLC47A1-6
Location (hg19): chr17:19507110-19508361
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1252 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT146507
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.861 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC47A1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC115989.1.1-5:1
4.0 lnc-AC115989.1.1-5:1
4.1 lnc-AC115989.1.1-5:1
5.0 lnc-AC115989.1.1-5:1
5.1 lnc-PIPOX-131:1
5.2 lnc-SLC47A1-6:1