Transcript: lnc-SLC51A-14:1

Basic information

LNCipedia transcript ID: lnc-SLC51A-14:1 
LNCipedia gene ID: lnc-SLC51A-14
Location (hg19): chr3:195448142-195461185
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 3026 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_2561_chr3:195448141-195461185_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.9507 non-coding 
CPAT coding probability 1.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC51A-14:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC069257.9.1-14:1
4.0 lnc-AC069257.9.1-14:1
4.1 lnc-AC069257.9.1-14:1
5.0 lnc-AC069257.9.1-14:1
5.1 lnc-PIGX-16:1
5.2 lnc-SLC51A-14:1