Transcript: lnc-SLC7A6OS-1:2

Basic information

LNCipedia transcript ID: lnc-SLC7A6OS-1:2 
LNCipedia gene ID: lnc-SLC7A6OS-1
Location (hg19): chr16:68270748-68271451
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 414 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261469.1|ENST00000564147.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -348.5299 non-coding 
CPAT coding probability 4.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC7A6OS-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC7A6OS-1:2
5.0 lnc-SLC7A6OS-1:2
5.1 lnc-SLC12A4-7:2
5.2 lnc-SLC7A6OS-1:2