Transcript: lnc-SLCO1A2-1:4

Basic information

LNCipedia transcript ID: lnc-SLCO1A2-1:4 
LNCipedia gene ID: lnc-SLCO1A2-1
Location (hg19): chr12:21426876-21477615
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3834 bp
Exons: 12
Sources: NONCODE v4
Alternative transcript names: NONHSAT027242
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2265.9245 coding 
CPAT coding probability 99.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLCO1A2-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RECQL-1:3
4.0 lnc-SLCO1A2-1:4
4.1 lnc-SLCO1A2-1:4
5.0 lnc-SLCO1A2-1:4
5.1 lnc-WBP11-49:3
5.2 lnc-SLCO1A2-1:4