Transcript: lnc-SLFN13-2:2

Basic information

LNCipedia transcript ID: lnc-SLFN13-2:2 
LNCipedia gene ID: lnc-SLFN13-2
Location (hg19): chr17:33797088-33797647
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 560 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT053099
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.8592 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLFN13-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLFN12L-2:1
4.0 lnc-SLFN12L-2:1
4.1 lnc-SLFN12L-2:1
5.0 lnc-SLFN12L-2:1
5.1 lnc-SRCIN1-89:1
5.2 lnc-SLFN13-2:2