Transcript: lnc-SLIT2-1:2

Basic information

LNCipedia transcript ID: lnc-SLIT2-1:2 
LNCipedia gene ID: lnc-SLIT2-1
Location (hg19): chr4:19457053-19659335
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 384 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248515.1|MICT00000262066.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.1361 non-coding 
CPAT coding probability 8.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLIT2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLIT2-1:2
5.0 lnc-SLIT2-1:2
5.1 lnc-USP17L28-70:4
5.2 lnc-SLIT2-1:2