Transcript: lnc-SLIT2-1:7

Basic information

LNCipedia transcript ID: lnc-SLIT2-1:7 
LNCipedia gene ID: lnc-SLIT2-1
Location (hg19): chr4:19457053-19911315
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 895 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248515.1|ENST00000511431.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.1361 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLIT2-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLIT2-1:7
5.0 lnc-SLIT2-1:7
5.1 lnc-USP17L28-70:6
5.2 lnc-SLIT2-1:7