Transcript: lnc-SLITRK6-25:1

Basic information

LNCipedia transcript ID: lnc-SLITRK6-25:1 
LNCipedia gene ID: lnc-SLITRK6-25
Location (hg19): chr13:89901072-89902354
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1283 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT034625
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.9442 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLITRK6-25:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLITRK6-25:1
4.0 lnc-SLITRK6-25:1
4.1 lnc-SLITRK6-25:1
5.0 lnc-SLITRK6-25:1
5.1 lnc-IRS2-105:1
5.2 lnc-SLITRK6-25:1