Transcript: lnc-SLTM-2:1

Basic information

LNCipedia transcript ID: lnc-SLTM-2:1 
LNCipedia gene ID: lnc-SLTM-2
Location (hg19): chr15:59211128-59394178
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1277 bp
Exons: 6
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000433570
Alternative gene names: ENSG00000247934


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.7398 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLTM-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLTM-1:1
3.1 lnc-SLTM-2:1
4.0 lnc-SLTM-2:1
4.1 lnc-SLTM-2:1
5.0 lnc-SLTM-2:1
5.1 lnc-ICE2-33:1
5.2 lnc-SLTM-2:1