Transcript: lnc-SLX1B-3:18

Basic information

LNCipedia transcript ID: lnc-SLX1B-3:18 
LNCipedia gene ID: lnc-SLX1B-3
Location (hg19): chr16:29165637-29344377
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3175 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000198106.7|FTMT26300044246.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 359.5704 coding 
CPAT coding probability 91.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLX1B-3:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNX29P2-3:7
5.0 lnc-SNX29P2-3:7
5.1 lnc-QPRT-14:14
5.2 lnc-SLX1B-3:18