Transcript: lnc-SMAD2-400:1

Basic information

LNCipedia transcript ID: lnc-SMAD2-400:1 
LNCipedia gene ID: lnc-SMAD2-400
Location (hg19): chr18:45553258-45555546
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2112 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT059180
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.8875 non-coding 
CPAT coding probability 63.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMAD2-400:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZBTB7C-2:1
4.0 lnc-ZBTB7C-2:1
4.1 lnc-ZBTB7C-2:1
5.0 lnc-ZBTB7C-2:1
5.1 lnc-SMAD2-4:1
5.2 lnc-SMAD2-400:1