Transcript: lnc-SMARCC2-1:2

Basic information

LNCipedia transcript ID: lnc-SMARCC2-1:2 
LNCipedia gene ID: lnc-SMARCC2-1
Location (hg19): chr12:56556143-56584079
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 414 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258199.1|ENST00000553176.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -118.3276 non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMARCC2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SMARCC2-1:2
5.0 lnc-SMARCC2-1:2
5.1 lnc-PMEL-21:1
5.2 lnc-SMARCC2-1:2