Transcript: lnc-SMCO3-1:2

Basic information

LNCipedia transcript ID: lnc-SMCO3-1:2 
LNCipedia gene ID: lnc-SMCO3-1
Location (hg19): chr12:14953934-14956410
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 554 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT027094
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -98.1021 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMCO3-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C12orf69-1:2
4.0 lnc-C12orf69-1:2
4.1 lnc-C12orf69-1:2
5.0 lnc-C12orf69-1:2
5.1 lnc-M6PR-53:2
5.2 lnc-SMCO3-1:2