Transcript: lnc-SMIM10L2B-1:5

Basic information

LNCipedia transcript ID: lnc-SMIM10L2B-1:5 
LNCipedia gene ID: lnc-SMIM10L2B-1
Location (hg19): chrX:134232427-134232739
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 313 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000196972.6|ENST00000535837.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 407.234 coding 
CPAT coding probability 89.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMIM10L2B-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM127B-1:9
5.0 lnc-FAM127B-1:9
5.1 lnc-ETDB-4:5
5.2 lnc-SMIM10L2B-1:5