Transcript: lnc-SMIM18-2:2

Basic information

LNCipedia transcript ID: lnc-SMIM18-2:2 
LNCipedia gene ID: lnc-SMIM18-2
Location (hg19): chr8:30421884-30428278
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 315 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT125872
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.121 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMIM18-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GS1-211B7.1.1-2:5
4.0 lnc-GS1-211B7.1.1-2:5
4.1 lnc-GS1-211B7.1.1-2:5
5.0 lnc-GS1-211B7.1.1-2:5
5.1 lnc-WRN-15:5
5.2 lnc-SMIM18-2:2