Transcript: lnc-SMIM34B-2:1

Basic information

LNCipedia transcript ID: lnc-SMIM34B-2:1 
LNCipedia gene ID: lnc-SMIM34B-2
Location (hg19): chr21:35791013-35796264
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1050 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000624951.1
Alternative gene names: ENSG00000278961.1; CH507-396I9.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 120.315 coding 
CPAT coding probability 95.03% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMIM34B-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AP000322.53.1-2:1
4.1 lnc-AP000322.53.1-2:1
5.0 lnc-AP000322.53.1-2:1
5.1 lnc-N6AMT1-159:1
5.2 lnc-SMIM34B-2:1