Transcript: lnc-SMN2-4:4

Basic information

LNCipedia transcript ID: lnc-SMN2-4:4 
LNCipedia gene ID: lnc-SMN2-4
Location (hg19): chr5:69711221-69743506
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1802 bp
Exons: 17
Sources: NONCODE v4
Alternative transcript names: NONHSAT101972
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2530.7085 coding 
CPAT coding probability 99.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMN2-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMN2-2:4
4.0 lnc-SMN2-4:4
4.1 lnc-SMN2-4:4
5.0 lnc-SMN2-4:4
5.1 lnc-BDP1-15:4
5.2 lnc-SMN2-4:4