Transcript: lnc-SNAPC3-1:8

Basic information

LNCipedia transcript ID: lnc-SNAPC3-1:8 
LNCipedia gene ID: lnc-SNAPC3-1
Location (hg19): chr9:15888035-15890761
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1833 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT130281
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.1782 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNAPC3-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNAPC3-1:6
4.0 lnc-C9orf93-1:5
4.1 lnc-C9orf93-1:5
5.0 lnc-C9orf93-1:5
5.1 lnc-RECK-326:1
5.2 lnc-SNAPC3-1:8