Transcript: lnc-SNAPC5-4:3

Basic information

LNCipedia transcript ID: lnc-SNAPC5-4:3 
LNCipedia gene ID: lnc-SNAPC5-4
Location (hg19): chr15:66795089-66795395
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 307 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT046801
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.3833 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNAPC5-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNAPC5-4:3
4.0 lnc-SNAPC5-4:3
4.1 lnc-SNAPC5-4:3
5.0 lnc-SNAPC5-4:3
5.1 lnc-TIPIN-8:3
5.2 lnc-SNAPC5-4:3